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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902857.1_cds_XP_016452858.1_47045
CDS Infomation

[gene=LOC107777364] [db_xref=GeneID:107777364] [protein=THUMP domain-containing protein 1-like isoform X2] [protein_id=XP_016452858.1] [location=join(11819..11893,14329..14817,15320..15459,15575..15695,16066..16206,16881..16961)] [gbkey=CDS]
Sequence

ATGGCTACAGACAACAAATCAAAGCCAAAAGCTACCAACAAAACAAAGAACAAGCAACGT
TATCGTCCCAACAATTTTTACGATGAGCTGGTACAGGGGACAGGTTCAAGTTTAGGACAT
GGAGAATTATCAGAAGAACCTAAAAACAAAAAGATGGTTTTCACATATTCTGATTCTTCT
AGTAGTGATGATGATGATGGTGGTGAAGGTGATGAAGACAAAGGAAATGATGAGAACCAA
ACCAAGGAAGAGACTTCAAAAATTGAGCAGAATCAGGAGAAAACTGATGAAGAAATAGGT
AGCTTGAAAAATGGTGGATCAGGGCCTGAAAACAAGGACAACATCTCTGCCGATGAGCAA
ATACAAGGAGATGCTGATAAGAAAGAGGAACTAGAGATAACTCATGAACAGAAAGATAGT
GAAGAGGGGGAGCCACCTGCAAAGAAACAATGTGTGGAAAGAGAAGCACCAAAAACTGGA
AATAATGTTGTTGGTAAGACAGAGGAGAAATCTGTAGATAAACTAATTGAAGCTGAGCTT
GCTGAGTTGGGAGACAAAAGTAAGAGGCGTTTTAACTACCTAGACTCGGGTTGCAATGGT
GTTGTTTTTGTTCAAATGCGAAAAAAAGATGGAGATCCCAACCCTAAGGAAATCATTCAA
CATATGATGTCCTCGCTTGCCTCGACGAAGAGACACGTATCGAGGTTCATATTGAGAGTG
TTACCAGTTGAAGTAACATGTTATGCATCAGAGGAGGAAATTGGAAGAGCAATAAAGCCT
CTTGTTGAACAGTACTTACCTGCTGAAACCGACACTCCAAAGAAGTTTGCAGTGCTTTAT
GAAGCTCGAGCAAATACTGGAATCAATAAGATGAAAATCATTGATACAGTGGCTAAATCT
GTTCCTTCACCTCACAAAGTTGATCTTAGCAACCCTGAGATAAACATAGTGGTTCAAATA
GTCAAGACTGTGTGCTTGCTTGGAGTTGTTGAAAAGTACAAGGAATTGTCCAAGTATAAC
TTGAGGCAGCTTACCTCTAAGAATTAA

Peptide Sequence

PEP ID

XP_016452858.1
PEP Infomation

PREDICTED: THUMP domain-containing protein 1-like isoform X2 [Nicotiana tabacum]
Sequence

MATDNKSKPKATNKTKNKQRYRPNNFYDELVQGTGSSLGHGELSEEPKNKKMVFTYSDSS
SSDDDDGGEGDEDKGNDENQTKEETSKIEQNQEKTDEEIGSLKNGGSGPENKDNISADEQ
IQGDADKKEELEITHEQKDSEEGEPPAKKQCVEREAPKTGNNVVGKTEEKSVDKLIEAEL
AELGDKSKRRFNYLDSGCNGVVFVQMRKKDGDPNPKEIIQHMMSSLASTKRHVSRFILRV
LPVEVTCYASEEEIGRAIKPLVEQYLPAETDTPKKFAVLYEARANTGINKMKIIDTVAKS
VPSPHKVDLSNPEINIVVQIVKTVCLLGVVEKYKELSKYNLRQLTSKN

Transcript Sequence

Gene sequence data has not been registered.